Python Morphology Toolbox

Pymorph is a collection of pure python implementations of many image morphology functions.

Includes basic operations such ...

Jug: A Task-Based Parallelization Framework

El Greco: El Graphical Models Compiler

Readmagick

Readmagick is a simple wrapper around ImageMagick's image reading functions.

Milk: Machine Learning Toolkit for Python

This is the code that I use for my research projects.

If you like ...

Jug Tutorial

Merge: Merge two directories without losing files

Mahotas: Image Processing in Python

Mahotas is a set of functions for image processing in Python.

It is completely based ...

Git Content Management System

Software

I have written some open-source software, some to scratch an itch, and some as part of my research.

Hex: Reimplementing TeX in Haskell

Hex is a reimplementation of TeX in Haskell. It is not very functional yet. It ...

FASTA Reader in Python

A very simple reader/writer for FASTA encoded DNA sequences.

# -*- coding: utf-8 -*-
# copyright  2006 inesc/id ...

Milksets: Machine Learning Datasets for Python

This packages contains some U.C.I. datasets in a common Pythonic interface, which ...

Python Snippets

Litte bits of code that are cute or otherwise helpful.

No Copy Reduce Operations for Numpy

Numpy arrays come with several reduce operations: sum(), std(), argmin(), min(), ....

The traditional implementation ...

What are suffix trees?

Suffix trees are a tree representation of a string and all its suffixes. Consider the string ...